adding file_viewer
This commit is contained in:
parent
f681f1012a
commit
6b12ab969b
2
generic_loader/.gitignore
vendored
2
generic_loader/.gitignore
vendored
@ -1,3 +1,5 @@
|
||||
/.venv
|
||||
/samples
|
||||
/.env
|
||||
__pycache__/
|
||||
venv/
|
||||
121
generic_loader/file_viewer.py
Normal file
121
generic_loader/file_viewer.py
Normal file
@ -0,0 +1,121 @@
|
||||
"""Standalone utility to download a .sas7bdat file from S3 and print a
|
||||
column-level summary of the first 10 rows.
|
||||
|
||||
Configure the four constants below, then run::
|
||||
|
||||
python3 file_viewer.py
|
||||
|
||||
Python 3.9 compatible.
|
||||
"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import os
|
||||
import sys
|
||||
|
||||
import boto3
|
||||
import pandas as pd
|
||||
import pyreadstat
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# Configuration — edit these before running
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
S3_BUCKET: str = "my-bucket"
|
||||
"""S3 bucket name."""
|
||||
|
||||
S3_KEY: str = "path/to/file.sas7bdat"
|
||||
"""Object key (path) within the bucket to the .sas7bdat file."""
|
||||
|
||||
LOCAL_FOLDER: str = "./downloads"
|
||||
"""Local directory to download the file into."""
|
||||
|
||||
AWS_PROFILE: str = "default"
|
||||
"""AWS CLI profile name used for authentication."""
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# Helpers
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
|
||||
def _download_from_s3(bucket: str, key: str, local_path: str) -> None:
|
||||
"""Download *key* from *bucket* to *local_path* using a named session."""
|
||||
session = boto3.Session(profile_name=AWS_PROFILE)
|
||||
s3 = session.client("s3")
|
||||
print(f"Downloading s3://{bucket}/{key} -> {local_path}")
|
||||
s3.download_file(bucket, key, local_path)
|
||||
print("Download complete.")
|
||||
|
||||
|
||||
def _read_sas_head(path: str, row_count: int = 10) -> pd.DataFrame:
|
||||
"""Read the first *row_count* rows of a .sas7bdat file."""
|
||||
df, _ = pyreadstat.read_sas7bdat(path, encoding="latin-1", row_count=row_count)
|
||||
return df
|
||||
|
||||
|
||||
def _sample_values(series: pd.Series, n: int = 3) -> str:
|
||||
"""Return up to *n* non-null sample values as a comma-separated string."""
|
||||
non_null = series.dropna()
|
||||
samples = non_null.head(n).tolist()
|
||||
if not samples:
|
||||
return "(all null)"
|
||||
return ", ".join(repr(v) for v in samples)
|
||||
|
||||
|
||||
def _print_summary(df: pd.DataFrame) -> None:
|
||||
"""Print a nicely formatted summary table to stdout."""
|
||||
# Pre-compute column data
|
||||
rows = []
|
||||
for col in df.columns:
|
||||
rows.append((col, str(df[col].dtype), _sample_values(df[col], 3)))
|
||||
|
||||
# Determine column widths
|
||||
hdr_name = "Column Name"
|
||||
hdr_dtype = "Data Type"
|
||||
hdr_samples = "Sample Values (up to 3)"
|
||||
|
||||
w_name = max(len(hdr_name), *(len(r[0]) for r in rows))
|
||||
w_dtype = max(len(hdr_dtype), *(len(r[1]) for r in rows))
|
||||
w_samples = max(len(hdr_samples), *(len(r[2]) for r in rows))
|
||||
|
||||
fmt = f" {{:<{w_name}}} {{:<{w_dtype}}} {{:<{w_samples}}}"
|
||||
sep = f" {'-' * w_name} {'-' * w_dtype} {'-' * w_samples}"
|
||||
|
||||
print()
|
||||
print(f" Summary of first {len(df)} row(s) ({len(df.columns)} columns)")
|
||||
print(sep)
|
||||
print(fmt.format(hdr_name, hdr_dtype, hdr_samples))
|
||||
print(sep)
|
||||
for name, dtype, samples in rows:
|
||||
print(fmt.format(name, dtype, samples))
|
||||
print(sep)
|
||||
print()
|
||||
|
||||
|
||||
# ---------------------------------------------------------------------------
|
||||
# Main
|
||||
# ---------------------------------------------------------------------------
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
# --- Download -----------------------------------------------------------
|
||||
os.makedirs(LOCAL_FOLDER, exist_ok=True)
|
||||
local_filename = os.path.basename(S3_KEY)
|
||||
local_path = os.path.join(LOCAL_FOLDER, local_filename)
|
||||
|
||||
try:
|
||||
_download_from_s3(S3_BUCKET, S3_KEY, local_path)
|
||||
except Exception as exc:
|
||||
print(f"S3 download error: {exc}", file=sys.stderr)
|
||||
sys.exit(1)
|
||||
|
||||
# --- Read & summarize ---------------------------------------------------
|
||||
try:
|
||||
df = _read_sas_head(local_path, row_count=10)
|
||||
except Exception as exc:
|
||||
print(f"File read error: {exc}", file=sys.stderr)
|
||||
sys.exit(2)
|
||||
|
||||
_print_summary(df)
|
||||
@ -4,3 +4,4 @@ numpy>=1.24,<2.1
|
||||
pyyaml>=6.0,<7.0
|
||||
psycopg2-binary>=2.9,<3.0
|
||||
python-dotenv>=1.0,<2.0
|
||||
boto3>=1.28,<2.0
|
||||
|
||||
Loading…
Reference in New Issue
Block a user